PIANO

An R/Bioconductor package for gene set analysis Overview of piano Gene set analysis using a variety of methods Piano is used for running gene set analysis (GSA) using a selection of available methods (some of which are also implemented in separate packages or other software) and starting from different kinds of gene level statistics. The…

lmm2met

lmm2met   Linear mixed-effects modeling to improve clinical metabolomics information. Version: 1.0 (12 September 2018) Description   Linear mixed-effects modelling for normalization of clinical metabolomics data by using subject metada. Installation and Running metabox   Require R software Install lmm2met using the following commands #Install devtools R package, if not exist install.packages(‘devtools’, repos=”http://cran.rstudio.com/”) library(devtools) #Install…

Metabox 2.0

Metabox 2.0 is an updated version of the R package Metabox, released in 2016. The tool includes several methods for data processing, statistical analysis, biomarker analysis, integrative analysis and data interpretation. Metabox 2.0 supports a wide range of users, from bench biologists to experienced bioinformaticians. It comes with an intuitive web interface for simple data…