Publications – Metabolomics and Systems Biology

Publications

Research articles

* = Corresponding author

All
2025
2024

LC-MS/MS Identifies Elevated Imidazole Propionate and Gut-Derived Metabolite Alterations in Peritoneal Dialysis Patients

Manokasemsan W, Jariyasopit N, Wanichthanarak K, Poungsombat P, Kurilung A, Limjiasahapong S, Thapa K, Sirivatanaukson Y, Ruksasuk S, Srithongkul T, Kitiyakara C, Khoomrung S. LC-MS/MS Identifies Elevated Imidazole Propionate and Gut-Derived Metabolite Alterations in Peritoneal Dialysis Patients. (2025), Computational and Structural Biotechnology Journal.

https://www.sciencedirect.com/science/article/pii/S2001037025005082

Spatial Mapping of Stereoisomeric and Isobaric Alkaloids in Mitragyna speciosa Tissues by High-Resolution DESI-cIM-MS

Wisanpitayakorn P, Konsue A, Sartyoungkul T, In-On A, Sirivatanauksorn Y, Gang DR, Kittakoop P, Khoomrung S. Spatial Mapping of Stereoisomeric and Isobaric Alkaloids in Mitragyna speciosa Tissues by High-Resolution DESI-cIM-MS. (2025), Analytical Chemistry.

https://pubs.acs.org/doi/full/10.1021/acs.analchem.5c04730

Unveiling distinct storage composition and starch properties in developing indica rice grains via transcriptional profiling and enzymatic activity analysis

Sangwongchai W, Wanichthanarak K, In-on A, Natee S, Champasri C, Sa-ingthong N, Beckles DM, Khoomrung S, Thitisaksakul M. Unveiling distinct storage composition and starch properties in developing indica rice grains via transcriptional profiling and enzymatic activity analysis. (2025), Computational and Structural Biotechnology Journal.

https://www.sciencedirect.com/science/article/pii/S2001037025004805

Plasma Metabolomic Analysis in Thai EGFR-mutated Non-Small Cell Lung Cancer Patients

Thamlikitkul L, Wanichthanarak K, Manocheewa S, Limjiasahapong S, Phonsatta N, Thangvichien S, Panya A, Sirivatanauksorn Y, Poungvarin N, Khoomrung S*. Plasma Metabolomic Analysis in Thai EGFR-mutated Non-Small Cell Lung Cancer Patients. (2025), Computational and Structural Biotechnology Journal.

https://www.sciencedirect.com/science/article/pii/S200103702500412X

Clinical and Bacterial Dynamics in the Development of Pitted Keratolysis

Laomoleethorn J, Poungsombat P, Bunyaratavej S, Jariyasopit N, Pattanaprichakul P, Leeyaphan C, Ongsri P, Jirawattanadon P, Saengthong-aram P, Khoomrung S*. Clinical and Bacterial Dynamics in the Development of Pitted Keratolysis. (2025), Journal of the American Academy of Dermatology.

https://www.jaad.org/article/S0190-9622(25)01323-4/abstract

LC-QTOF-MSE with MS1-based precursor ion quantification and SiMD-assisted identification enhances human urine metabolite analysis

Kurilung A, Limjiasahapong S, Wanichthanarak K, Manokasemsan W, Kaewnarin K, Duangkumpha K, Manocheewa S, Tansawat R, Chaiteerakij R, Nookaew I, Sirivatanauksorn Y, Khoomrung S*. LC-QTOF-MSE with MS1-based precursor ion quantification and SiMD-assisted identification enhances human urine metabolite analysis. (2025), Computational and Structural Biotechnology Journal.

https://www.sciencedirect.com/science/article/pii/S2001037025002739

Characterization of airborne microbial communities in northern Thailand: Impacts of smoke haze versus non-haze conditions

Yabueng N, Sansupa C, Noirungsee N, Kraisitnitikul P, Chansuebsri S, Janta R, Khoomrung S, Disayathanoowat T, Chantara S. Characterization of airborne microbial communities in northern Thailand: Impacts of smoke haze versus non-haze conditions. (2025), Environmental Pollution.

https://www.sciencedirect.com/science/article/pii/S0269749124020190

Perturbations in L-serine metabolism regulate protein quality control through the sensor of the retrograde response pathway RTG2 in Saccharomyces cerevisiae

Saxena K, Andersson R, Widlund PO, Khoomrung S, Hanzén S, Nielsen J, Kumar N, Molin M, Nyström T. Perturbations in L-serine metabolism regulates protein quality control through sensor of retrograde response pathway Rtg2 in S.cerevisae. (2025), J Biol Chem.

https://www.sciencedirect.com/science/article/pii/S0021925825021799

Investigation of southern Thailand sweet pickled mango metabolic profiles related to deterioration

N. Indrati, N. Phonsatta, P. Poungsombat, S. Khoomrung, A. Panya, P. Sumpavapol*, Investigation of southern Thailand sweet pickled mango metabolic profiles related to deterioration. (2025), Food Chemistry.

https://www.sciencedirect.com/science/article/pii/S0308814625009148

Multi-Pass Arrival Time Correction in Cyclic Ion Mobility Mass Spectrometry for Imaging and Shotgun Lipidomics

P. Wisanpitayakorn, N. Jariyasopit, K. Duangkumpha, J. X. Goh, M. E. Palmer, Y. Sirivatanauksorn, S. Khoomrung*. Multi-Pass Arrival Time Correction in Cyclic Ion Mobility Mass Spectrometry for Imaging and Shotgun Lipidomics. (2024), ACS Meas. Sci. Au.

https://pubs.acs.org/doi/10.1021/acsmeasuresciau.4c00077